Bioinformatics

CSM17

This page contains the lecture slides, but do not download them all now because they may change during the course.

The module is taught by Dr Jonathan Y. Clark j.y.clark@surrey.ac.uk.

You can download the course outline now as an Acrobat pdf file. bioinformatics-outline

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COURSE NEWS AND INFORMATION: * UPDATED 11/05/09 *

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*IMPORTANT ANNOUNCEMENTS*:

THE COURSEWORK VIVAS WILL TAKE PLACE ON WEDNESDAY 13TH MAY. THE SCHEDULE HAS BEEN EMAILED TO YOU, BUT IS ALSO AVAILABLE HERE AS AN ACROBAT PDF FILE: viva_list.pdf

THE PAST EXAMINATION PAPERS FOR 2006, 2007 and 2008 CAN now be downloaded from links near the bottom of this page.

Lecture slides

Lecture

Slides (1 per page)

Slides (6 per page)

Main Topic
1 bioweek1.pdf bioweek1(6).pdf Introduction
2 bioweek2.pdf bioweek2(6).pdf Classification
3 bioweek3.pdf bioweek3(6).pdf Identification
4 bioweek4.pdf bioweek4(6).pdf Evolutionary Systems
5 bioweek5.pdf bioweek5(6).pdf Inheritance
6 bioweek6.pdf bioweek6(6).pdf Molecular Analysis (Part 1)
7 bioweek7.pdf bioweek7(6).pdf Molecular Analysis (Part 2)
8 bioweek8.pdf bioweek8(6).pdf Simulations (Part 1)
9 bioweek9.pdf bioweek9(6).pdf Simulations (Part 2)

Session 2 and 3 Lab Session 9th and 23rd February:

CHARS ITEMS SPECS

Session 4 Lab Session 2nd March:

THE FIRST FILE: infile.min: infile.min

THE SECOND FILE: infile.ok: infile.ok

Session 6 Lab Session 9th March 2009:

THE DNA DATA FILE: dnadata.phy

Session 8/9 Lab Session 27th April2009:

Plife program: plife.exe

Plife helpfile: plife.txt

BioFractal Zipfile :BioFractal.zip

* COURSEWORK is now downloadable from from this link. * :

It will be also available on U-Learn very soon (submission will be electronic only, via U-Learn). COURSEWORK

Other downloads:

Cluster Analysis Guide (for week 3):ClusterV4.doc

The 2006 examination (as Acrobat pdf files) can be downloaded from the links below

The 2007 examination (as Acrobat pdf files) can be downloaded from the links below

The 2008 examination (as Acrobat pdf files) can be downloaded from the links below